Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913868.1_cds_XP_016463894.1_56977
CDS Infomation

[gene=LOC107786893] [db_xref=GeneID:107786893] [protein=glucan endo-1,3-beta-glucosidase, acidic-like] [protein_id=XP_016463894.1] [location=join(33540..33588,34122..35076,35495..35562,37791..38284)] [gbkey=CDS]
Sequence

ATGGCTATACTTCTGCTTGTTGCACTGTTGCCAAATCTTCTAATATTAGGAGTGCAGTCA
ATTGGAGTATGCTATGGGAGAAATGGCAACAATTTACCATCTCCTCAAGATGTCATAAAT
CTTTATAAAGATAATGGCATAACAAACTTGAGAATTTATGATCCAAATCCTGAAGTACTC
AATGCTCTTAGAGGTAGTAACGTTGAAATAATTCTTGACATTCCCAATTACAATCTTCAA
GCCTTAACAGATCCAAATGCAGCTACAAATTGGGTACATACCGATATTATTAACTATTTT
CCAAGTGTTAAAATCAAATATATAGCTGCTGGAAATGAAGTTTCTCCAGGATTTCCTCAA
ACAGCTCAATTTGCTCCTTTTATTCTCCCTGCTATGCATAATGTACAACGAGCATTAGCA
GCTTATGGGGTACAAAACCAAATCAAGGTCTCAACGGTCATGTATTCGGGTATTTTAACG
AATACCTACCCTCCTTGGAACGCGATTTTTCGCGATGACCTAAAGGGTTTCATCGTCCCG
ATAGTGCAATTCCTGGCACAGAATGACTCTCCGTTGTTAGCGAATATTTACCCTTACTTC
GCGTATCGAGGTGACCCGGCCCATGTTGCACTCCCTTATGCACTATTTACCCAACCGGGA
GCGGATCCCGGGTCGGGTTATCATAACTTGTTTGATGCTATGTTGGATGCACAATATTAT
GCACTTGAGAAAGCCGATGGAAATAACATAGAAATTGTTGTTGCTGAAAGTGGATGGCCT
TCTGATGGTGGATTTGGAGCAAGTATGGAAAATGCTAGAACTTATTATATAAATTTGAAT
AATCATGTGAAATTAGGAGGAGGAACTCCACATAAGCCTGGAAAAGTTATAGAAACTTAT
TTGTTCGCTATGTTTGATGAAAATTTGAAGGAAGGAGATGAGACTGAGAAACATTATGGA
GTGTTTTATCCTAATAAAGCTAAGAAGTATAATATTAACTTCCATTTTTTAATCATATAC
ATAGTTTATACATTGATTAAACATAATTATACACATATAATACATAAATTATGGATTTGG
GTGCCGGCAGTTCCTGCATGGGAGAAGGAATTTTGTTTAAAGAATGGTGAATTCACATGG
GAAAATTTCTTGGAATGCAAGAGATATACATATCACTTTTCAAAAATATTGGAATGGAAT
GATTCAGCTGCCGAAGAAGCATTTAATTATGCAAAAAATAGATTTAATGCTGAGTTTCAT
AACTTGAAATTTATTGATACTAATTTTGAGCCAAACCCTAATCTCTACATTGATGAAATT
GATTGGAATAATTCAGAAAATGATTCTCAGCTTTTATTGGAATTGGAATTGGCATTGAAA
GCTGCAGAAGAAGAAGAAGATGATGGAATTAATATTCCAAAGCATTTGAGGAGAAATTAT
GATATGCCAATTGAGAAAATTATACCAACTGGTTGGAATGTTGTTGATTTTGTTGAATGT
AATGTTTTGACTGGTCTTATTGTGGGTGATCATAGCAGTTGCGGTGAAGGTAGCGAAGTC
ATGTGA

Peptide Sequence

PEP ID

XP_016463894.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase, acidic-like [Nicotiana tabacum]
Sequence

MAILLLVALLPNLLILGVQSIGVCYGRNGNNLPSPQDVINLYKDNGITNLRIYDPNPEVL
NALRGSNVEIILDIPNYNLQALTDPNAATNWVHTDIINYFPSVKIKYIAAGNEVSPGFPQ
TAQFAPFILPAMHNVQRALAAYGVQNQIKVSTVMYSGILTNTYPPWNAIFRDDLKGFIVP
IVQFLAQNDSPLLANIYPYFAYRGDPAHVALPYALFTQPGADPGSGYHNLFDAMLDAQYY
ALEKADGNNIEIVVAESGWPSDGGFGASMENARTYYINLNNHVKLGGGTPHKPGKVIETY
LFAMFDENLKEGDETEKHYGVFYPNKAKKYNINFHFLIIYIVYTLIKHNYTHIIHKLWIW
VPAVPAWEKEFCLKNGEFTWENFLECKRYTYHFSKILEWNDSAAEEAFNYAKNRFNAEFH
NLKFIDTNFEPNPNLYIDEIDWNNSENDSQLLLELELALKAAEEEEDDGINIPKHLRRNY
DMPIEKIIPTGWNVVDFVECNVLTGLIVGDHSSCGEGSEVM

Transcript Sequence

Gene sequence data has not been registered.